PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan016709
Common NameERF4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 122aa    MW: 13857.7 Da    PI: 10.7127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-71205PU_refplantGDBView CDS
gnl|UG|Aan#S55182568PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-71206PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-203180255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r +lg+f+tae+Aa+a++aa+ +l+g
  Aan016709 31 HYRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTAEDAARAYDAAAFALRG 80
               69*******.**********883....5999**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.58E-233190IPR016177DNA-binding domain
PROSITE profilePS5103223.6833188IPR001471AP2/ERF domain
SMARTSM003807.9E-393194IPR001471AP2/ERF domain
PfamPF008471.2E-123180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-323189IPR001471AP2/ERF domain
CDDcd000183.72E-183190No hitNo description
PRINTSPR003677.9E-113243IPR001471AP2/ERF domain
PRINTSPR003677.9E-115470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MAIIFGDTTP NDQSLVQSPT TRSPPSLKQF HYRGVRKRPW GRYAAEIRDP WKKTRRWLGT  60
FDTAEDAARA YDAAAFALRG SKAKMNFPAS FYPSESGTSD RKIRTTTEKA VLFDLNLPAP  120
MW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-243195570ATERF1
3gcc_A7e-243195570ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.202710.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493753.11e-31PREDICTED: ethylene-responsive transcription factor 8-like
RefseqXP_015890508.12e-31PREDICTED: ethylene-responsive transcription factor 12
RefseqXP_006377396.13e-31ERF domain protein 12
RefseqXP_011043423.13e-31PREDICTED: ethylene-responsive transcription factor 12-like
SwissprotQ9FE675e-31ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLM4IXJ74e-71M4IXJ7_ARTAN; Ethylene-responsive transcription factor 4
STRINGPOPTR_0011s05570.18e-31(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-22ERF domain protein 12
Publications ? help Back to Top
  1. Lu X, et al.
    AaORA, a trichome-specific AP2/ERF transcription factor of Artemisia annua, is a positive regulator in the artemisinin biosynthetic pathway and in disease resistance to Botrytis cinerea.
    New Phytol., 2013. 198(4): p. 1191-202
    [PMID:23448426]